The detailed information of tRNA gene sequence


Sequence ID>WENV180085511
Genome IDMPMD02336096
Search identical group
Phylum/Class[MPMD] marine metagenome; 120 m water sample filtered on 30 um supor filter
Species
Start position on genome 1237
End posion on genome 1165
Amino Acid Ala
Anticodon GGC
Upstream region at tRNA start position 
gactgattta
tRNA gene sequence 
GGGGCATTAGCTCAGTTGGTAGAGCGCTTCAATGGCATTGAAGAGGTCAACGGTTCGATT
CCGTTATGCTCCAgtc
Downstream region at tRNA end position 
ttcgttcgac
Secondary structure (Cloverleaf model)
>WENV180085511	Ala	GGC
                   a      Agtc ttcgttcgac
                     G - C
                     G - C
                     G + T
                     G - C
                     C - G
                     A - T
                     T - A          T T
                    T     T T G C C     A
      T G A        A      | | | | |     G
    T       C T C G       A A C G G     C
    G       | | | |                 T T
    G       G A G C
      T A          G     AGGTC
                    C - G
                    T - A
                    T - A
                    C - G
                    A - T
                  A       T
                  T       A
                    G G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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