The detailed information of tRNA gene sequence


Sequence ID>WENV180085576
Genome IDMPMD02345900
Search identical group
Phylum/Class[MPMD] marine metagenome; 120 m water sample filtered on 30 um supor filter
Species
Start position on genome 1601
End posion on genome 1689
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
gtggcgccct
tRNA gene sequence 
GGAGGGATGCGAGAGCGGCCGATTCGGCACGCTTGGAAAGCGTGTGTGGCCTTACAGTCA
CCGTGGGTTCGAATCCCACTCCCTCCGCCg
Downstream region at tRNA end position 
tttgccaact
Secondary structure (Cloverleaf model)
>WENV180085576	Ser	GGA
                   t      GCCg tttgccaact
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     A - T          T A
                    T     C A C C C     A
      C G A        G      | | | | |     G
    G       G A G C       G T G G G     C
    G       + | | |                 T T
    C       T T C G
      C G A        G     TGTGGCCTTACAGTCACC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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