The detailed information of tRNA gene sequence


Sequence ID>WENV180085595
Genome IDMPMD02347453
Search identical group
Phylum/Class[MPMD] marine metagenome; 120 m water sample filtered on 30 um supor filter
Species
Start position on genome 697
End posion on genome 621
Amino Acid Ile2
Anticodon CAT
Upstream region at tRNA start position 
cttcccccgc
tRNA gene sequence 
GGGCCCTTAGCTCAGTCGGTTAGAGCAGTCGACTCATAATCGATCGGTCCCAGGTTCGAG
TCCTGGAGGGCCCACCA
Downstream region at tRNA end position 
gcttcccgtc
Secondary structure (Cloverleaf model)
>WENV180085595	Ile2	CAT
                   c      ACCA gcttcccgtc
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     T - A          T G
                    T     G G T C C     A
      T G A        A      | | | | |     G
    C       C T C G       C C A G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     CGGTC
                    G + T
                    T - A
                    C - G
                    G - C
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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