The detailed information of tRNA gene sequence


Sequence ID>WENV180085596
Genome IDMPMD02347546
Search identical group
Phylum/Class[MPMD] marine metagenome; 120 m water sample filtered on 30 um supor filter
Species
Start position on genome 171
End posion on genome 246
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
cgagatcgat
tRNA gene sequence 
AGGCCAGTAGCTCAATTGGCAGAGCGGCGGTCTCCAAAACCGCAGGTTGGGGGTTCGATT
CCCTCCTGGCCTGCCA
Downstream region at tRNA end position 
tttcgatcgg
Secondary structure (Cloverleaf model)
>WENV180085596	Trp	CCA
                   t      GCCA tttcgatcgg
                     A - T
                     G - C
                     G - C
                     C - G
                     C - G
                     A - T
                     G - C          T T
                    T     C T C C C     A
      T A A        A      | + | | |     G
    T       C T C G       G G G G G     C
    G       | | | |                 T T
    G       G A G C
      C A          G     AGGTT
                    G - C
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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