The detailed information of tRNA gene sequence


Sequence ID>WENV180085613
Genome IDMPMD02349648
Search identical group
Phylum/Class[MPMD] marine metagenome; 120 m water sample filtered on 30 um supor filter
Species
Start position on genome 1071
End posion on genome 1162
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
agaggagagg
tRNA gene sequence 
GGTGGGTTGGCAGAGTCTGGCTTATTGCGTTGGTCTTGAAAACCAATGTACCTTTATCGG
TACCGAAGGTTCGAATCCTTCACCCACCGCCA
Downstream region at tRNA end position 
aattaattat
Secondary structure (Cloverleaf model)
>WENV180085613	Ser	TGA
                   g      GCCA aattaattat
                     G - C
                     G - C
                     T - A
                     G - C
                     G - C
                     G - C
                     T - A          T A
                    T     C T T C C     A
    C T G A        G      | | | | |     G
  T         G A C G       G A A G G     C
  G         + | | |                 T T
  G         T T G C
    C T T A        G     TGTACCTTTATCGGTACC
                    T - A
                    T - A
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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