The detailed information of tRNA gene sequence


Sequence ID>WENV180085617
Genome IDMPMD02350090
Search identical group
Phylum/Class[MPMD] marine metagenome; 120 m water sample filtered on 30 um supor filter
Species
Start position on genome 6393
End posion on genome 6318
Amino Acid fMet
Anticodon CAT
Upstream region at tRNA start position 
ggttttctgt
tRNA gene sequence 
TGCGGGGTGGAGCAGTCTGGCAGCTCGTCGGGCTCATAACCCGAAGGTCGTAGGTTCGAA
TCCTACCCCCGCTACCg
Downstream region at tRNA end position 
tttgtggcga
Secondary structure (Cloverleaf model)
>WENV180085617	fMet	CAT
                   t      ACCg tttgtggcga
                     T   T
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C A T C C     A
      T G A        G      | | | | |     G
    C       C G A G       G T A G G     C
    T       | | | |                 T T
    G       G C T C
      G C A        G     AGGTC
                    T - A
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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