The detailed information of tRNA gene sequence


Sequence ID>WENV180085676
Genome IDMPMD02357614
Search identical group
Phylum/Class[MPMD] marine metagenome; 120 m water sample filtered on 30 um supor filter
Species
Start position on genome 934
End posion on genome 1010
Amino Acid fMet
Anticodon CAT
Upstream region at tRNA start position 
cgtgttgcgg
tRNA gene sequence 
TGCGGGGTGGAGCAGTCTGGCAGCTCGTCGGGCTCATAACCCGAAGGTCGTAGGTTCGAA
TCCTACCCCCGCTACCA
Downstream region at tRNA end position 
aacgtggtga
Secondary structure (Cloverleaf model)
>WENV180085676	fMet	CAT
                   g      ACCA aacgtggtga
                     T   T
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C A T C C     A
      T G A        G      | | | | |     G
    C       C G A G       G T A G G     C
    T       | | | |                 T T
    G       G C T C
      G C A        G     AGGTC
                    T - A
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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