The detailed information of tRNA gene sequence


Sequence ID>WENV180085722
Genome IDMPMD02365187
Search identical group
Phylum/Class[MPMD] marine metagenome; 120 m water sample filtered on 30 um supor filter
Species
Start position on genome 500
End posion on genome 426
Amino Acid fMet
Anticodon CAT
Upstream region at tRNA start position 
atatatcagg
tRNA gene sequence 
CGCGGGATGGAGCAGTCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGGAGGTTCAAA
TCCTTCTCCCGCTACaa
Downstream region at tRNA end position 
agaggaagac
Secondary structure (Cloverleaf model)
>WENV180085722	fMet	CAT
                   g      ACaa agaggaagac
                     C   T
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     A - T          T A
                    T     C T T C C     A
      T G A        G      | + | | |     A
    C       C G A G       G G A G G     C
    T       | | | |                 T T
    G       G C T C
      G T A        G     AGGTC
                    T - A
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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