The detailed information of tRNA gene sequence


Sequence ID>WENV180085726
Genome IDMPMD02365812
Search identical group
Phylum/Class[MPMD] marine metagenome; 120 m water sample filtered on 30 um supor filter
Species
Start position on genome 1115
End posion on genome 1196
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
cgagcacaga
tRNA gene sequence 
GACAGTGTGTCCGAGCGGTTAAGGAGATGGACTCGAATTCCTTTGGGCTCTGCCCGCAGG
GGTTCGAATCCCCTCGCTGTCGttt
Downstream region at tRNA end position 
tcgacttgct
Secondary structure (Cloverleaf model)
>WENV180085726	Ser	CGA
                   a      Gttt tcgacttgct
                     G - C
                     A - T
                     C - G
                     A - T
                     G - C
                     T + G
                     G - C          T A
                    T     T C C C C     A
      C G A        G      | | | | |     G
    G       G C C T       A G G G G     C
    G         | | |                 T T
    T       A G G A
      T A          G     TGGGCTCTGCCCGC
                    A - T
                    T   T
                    G - C
                    G - C
                    A - T
                  C       T
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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