The detailed information of tRNA gene sequence


Sequence ID>WENV180085757
Genome IDMPMD02370011
Search identical group
Phylum/Class[MPMD] marine metagenome; 120 m water sample filtered on 30 um supor filter
Species
Start position on genome 663
End posion on genome 744
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
agcagcagca
tRNA gene sequence 
GCAGACGTACCCAAGTGGTTACGGGGCTCGCCTGCTAAGCGAGTGTGCTCTGCATGCGCA
GGTTCGAACCCTGCCGTCTGCGtat
Downstream region at tRNA end position 
ttccccagca
Secondary structure (Cloverleaf model)
>WENV180085757	Ser	GCT
                   a      Gtat ttccccagca
                     G - C
                     C - G
                     A - T
                     G - C
                     A - T
                     C - G
                     G - C          C A
                    T     C G T C C     A
      T G A        A      | | | | |     G
    G       A C C C       G C A G G     C
    G         | | |                 T T
    T       C G G G
      T A          G     TGTGCTCTGCATGC
                    C - G
                    T - A
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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