The detailed information of tRNA gene sequence


Sequence ID>WENV180085766
Genome IDMPMD02371063
Search identical group
Phylum/Class[MPMD] marine metagenome; 120 m water sample filtered on 30 um supor filter
Species
Start position on genome 18438
End posion on genome 18351
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
tctctaaatc
tRNA gene sequence 
GGAGAGATGGCTGAGTGGTCGAAAGCGGCGGTCTTGAAAACCGTTGAGGGGCAACCCTCC
CTGGGTTCGAATCCCAGTCTCTCCGCCA
Downstream region at tRNA end position 
tttttatcta
Secondary structure (Cloverleaf model)
>WENV180085766	Ser	TGA
                   c      GCCA tttttatcta
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     G A C C C     A
      T G A        G      | | | | |     G
    G       G T C G       C T G G G     C
    G         | | |                 T T
    T       A A G C
      C G A        G     TGAGGGGCAACCCTCC
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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