The detailed information of tRNA gene sequence


Sequence ID>WENV180085808
Genome IDMPMD02375140
Search identical group
Phylum/Class[MPMD] marine metagenome; 120 m water sample filtered on 30 um supor filter
Species
Start position on genome 557
End posion on genome 468
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
taacttattc
tRNA gene sequence 
GGAGAGATGGCCGAGCGGTTTAAGGCGCACGCTTGGAAAGCGTGTATACTGTTAAAGGTA
TCGTGGGTTCGAATCCCACTCTCTCCGCCA
Downstream region at tRNA end position 
tttaatgaaa
Secondary structure (Cloverleaf model)
>WENV180085808	Ser	GGA
                   c      GCCA tttaatgaaa
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C A C C C     A
      C G A        G      | | | | |     G
    G       G C C G       G T G G G     C
    G         | | |                 T T
    T       A G G C
      T T A        G     TATACTGTTAAAGGTATC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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