The detailed information of tRNA gene sequence


Sequence ID>WENV180085828
Genome IDMPMD02376944
Search identical group
Phylum/Class[MPMD] marine metagenome; 120 m water sample filtered on 30 um supor filter
Species
Start position on genome 1019
End posion on genome 934
Amino Acid Leu
Anticodon CAG
Upstream region at tRNA start position 
gctcgcccag
tRNA gene sequence 
GCGGCTGTGGCGGAATTGGCAGACGCGCTAGATTCAGGTTCTAGTGAGAGTAAAATCTCG
TGGAGGTTCGACTCCTCTCAGCCGCAtga
Downstream region at tRNA end position 
atacaagggc
Secondary structure (Cloverleaf model)
>WENV180085828	Leu	CAG
                   g      Atga atacaagggc
                     G - C
                     C - G
                     G - C
                     G - C
                     C - G
                     T - A
                     G - C          T C
                    T     T C T C C     A
      T A A        G      + | | | |     G
    T       G G C G       G G A G G     C
    G         | | |                 T T
    G       A C G C
      C A G        G     TGAGAGTAAAATCTCGT
                    C - G
                    T - A
                    A - T
                    G - C
                    A - T
                  T       T
                  T       G
                    C A G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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