The detailed information of tRNA gene sequence


Sequence ID>WENV180085830
Genome IDMPMD02377649
Search identical group
Phylum/Class[MPMD] marine metagenome; 120 m water sample filtered on 30 um supor filter
Species
Start position on genome 2267
End posion on genome 2190
Amino Acid fMet
Anticodon CAT
Upstream region at tRNA start position 
gcggccccgt
tRNA gene sequence 
AGCGGGTTGGAGTAGTCAGGTTATCTCGTCGGGCTCATAACCCGGAGACCGGTGGTTCAA
ATCCACCATCCGCTACCA
Downstream region at tRNA end position 
agaatttgta
Secondary structure (Cloverleaf model)
>WENV180085830	fMet	CAT
                   t      ACCA agaatttgta
                     A - T
                     G - C
                     C - G
                     G - C
                     G - C
                     G + T
                     T - A          T A
                    T     C C A C C     A
    C T G A        G      | | | | |     A
  A         T G A G       G G T G G     C
  G           | | |                 T T
  G         T C T C
    T T A          G     AGACC
                    T + G
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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