The detailed information of tRNA gene sequence


Sequence ID>WENV180085831
Genome IDMPMD02377907
Search identical group
Phylum/Class[MPMD] marine metagenome; 120 m water sample filtered on 30 um supor filter
Species
Start position on genome 148
End posion on genome 225
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
agaatgagaa
tRNA gene sequence 
AGGTCTGTAGCTCTAATCGGCTAGAGCACCGGATTCCAAATCCGGGTGTTGGGGGTTCGA
ATCCCTCCAGACCTGCCA
Downstream region at tRNA end position 
gaatatttta
Secondary structure (Cloverleaf model)
>WENV180085831	Trp	CCA
                   a      GCCA gaatatttta
                     A - T
                     G - C
                     G - C
                     T - A
                     C - G
                     T - A
                     G - C          T A
                    T     C T C C C     A
    T A A T        A      | + | | |     G
  C         C T C G       G G G G G     C
  G         | | | |                 T T
  G         G A G C
    C T A          A     GTGTT
                    C - G
                    C - G
                    G - C
                    G - C
                    A - T
                  T       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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