The detailed information of tRNA gene sequence


Sequence ID>WENV180085833
Genome IDMPMD02378669
Search identical group
Phylum/Class[MPMD] marine metagenome; 120 m water sample filtered on 30 um supor filter
Species
Start position on genome 184
End posion on genome 90
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
tgggttacat
tRNA gene sequence 
GGAGGTGATCGGCGGCCTGGTGGCGCCCCTGGTCTTCAAAACCAGTGTGGGGCTCAACAA
AGTCCTGGGTGGGTTCGATTCCCATTCACCTCCGAta
Downstream region at tRNA end position 
gacgaaaagc
Secondary structure (Cloverleaf model)
>WENV180085833	SeC	TCA
                   t      GAta gacgaaaagc
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     T - A
                     G - C
                     A - T          T T
                    T     T A C C C     A
      C C G        C      + | | | |     G
    T       G C G G       G T G G G     C
    G       | | | |                 T T
    G       C G C C
      T G G        C     TGTGGGGCTCAACAAAGTCCTGG
                    C - G
                    T - A
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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