The detailed information of tRNA gene sequence


Sequence ID>WENV180085835
Genome IDMPMD02378909
Search identical group
Phylum/Class[MPMD] marine metagenome; 120 m water sample filtered on 30 um supor filter
Species
Start position on genome 1526
End posion on genome 1602
Amino Acid fMet
Anticodon CAT
Upstream region at tRNA start position 
gctccgcgga
tRNA gene sequence 
TGCGGGGTGGAGCAGTCTGGCAGCTCGTCGGGCTCATAACCCGAAGGTCGCAGGTTCAAA
TCCTGCCCCCGCTACCA
Downstream region at tRNA end position 
gaattggtag
Secondary structure (Cloverleaf model)
>WENV180085835	fMet	CAT
                   a      ACCA gaattggtag
                     T   T
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C G T C C     A
      T G A        G      | | | | |     A
    C       C G A G       G C A G G     C
    T       | | | |                 T T
    G       G C T C
      G C A        G     AGGTC
                    T - A
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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