The detailed information of tRNA gene sequence


Sequence ID>WENV180085865
Genome IDMPMD02383346
Search identical group
Phylum/Class[MPMD] marine metagenome; 120 m water sample filtered on 30 um supor filter
Species
Start position on genome 3886
End posion on genome 3799
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
ggcccaccac
tRNA gene sequence 
GGAGGCGTGGCAGAGCGGCCGAATGCACTGGTTTTGAAAACCAGCGTGGTGCAAGCCACC
GGGGGTTCGAATCCTCCCGCCTCCGCCA
Downstream region at tRNA end position 
gaacgcggac
Secondary structure (Cloverleaf model)
>WENV180085865	Ser	TGA
                   c      GCCA gaacgcggac
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     C - G
                     G - C          T A
                    T     C C T C C     A
      C G A        G      | | + | |     G
    G       G A C G       G G G G G     C
    G         | | |                 T T
    C       A T G C
      C G A        A     CGTGGTGCAAGCCACC
                    C - G
                    T - A
                    G - C
                    G - C
                    T - A
                  T       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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