The detailed information of tRNA gene sequence


Sequence ID>WENV180085879
Genome IDMPMD02385504
Search identical group
Phylum/Class[MPMD] marine metagenome; 120 m water sample filtered on 30 um supor filter
Species
Start position on genome 7607
End posion on genome 7698
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
aaacacactt
tRNA gene sequence 
GGAGAGGTGGCCGAGCTGGCTGAAGGCGCTCGCCTGCTAAGTGAGTAACCGGAGATAATC
TGGTTCGAGAGTTCGAATCTCTCCCTCTCCGCta
Downstream region at tRNA end position 
aaaagcttcg
Secondary structure (Cloverleaf model)
>WENV180085879	Ser	GCT
                   t      GCta aaaagcttcg
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C T C     A
    T C G A        G      | | | | |     G
  G         G C C G       G A G A G     C
  G           | | |                 T T
  C         A G G C
    T G A          G     TAACCGGAGATAATCTGGTTC
                    C - G
                    T - A
                    C - G
                    G + T
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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