The detailed information of tRNA gene sequence


Sequence ID>WENV180085888
Genome IDMPMD02386915
Search identical group
Phylum/Class[MPMD] marine metagenome; 120 m water sample filtered on 30 um supor filter
Species
Start position on genome 262
End posion on genome 343
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
ggccaccaaa
tRNA gene sequence 
GCCACTTTGCCCGAGCGGTTAAGGCGTCGGCCTGCTAAGCCGATGGGGTCTCCCCGCGTG
GGTTCGAATCCCACAGGTGTCGttt
Downstream region at tRNA end position 
ttgcgcctgc
Secondary structure (Cloverleaf model)
>WENV180085888	Ser	GCT
                   a      Gttt ttgcgcctgc
                     G - C
                     C   T
                     C - G
                     A - T
                     C - G
                     T + G
                     T - A          T A
                    T     C A C C C     A
      C G A        G      | | | | |     G
    G       G C C C       G T G G G     C
    G         | |                   T T
    T       A G G C
      T A          G     TGGGGTCTCCCCGC
                    T - A
                    C - G
                    G - C
                    G - C
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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