The detailed information of tRNA gene sequence


Sequence ID>WENV180085891
Genome IDMPMD02387277
Search identical group
Phylum/Class[MPMD] marine metagenome; 120 m water sample filtered on 30 um supor filter
Species
Start position on genome 8577
End posion on genome 8665
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
agacgaatta
tRNA gene sequence 
GCGGGGGTCGCATAGTCTGGCCATTGCGTTGGATTGCTAATCCAATGGGAGTTAATCCCA
CGGGGGTTCAAATCCCCCTCCCCGCGCCA
Downstream region at tRNA end position 
agcgatagtg
Secondary structure (Cloverleaf model)
>WENV180085891	Ser	GCT
                   a      GCCA agcgatagtg
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     G + T          T A
                    T     C C C C C     A
    C T G A        C      | | | | |     A
  T         T A C G       G G G G G     C
  G           | | |                 T T
  G         T T G C
    C C A          G     TGGGAGTTAATCCCAC
                    T - A
                    T - A
                    G - C
                    G - C
                    A - T
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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