The detailed information of tRNA gene sequence


Sequence ID>WENV180085903
Genome IDMPMD02389524
Search identical group
Phylum/Class[MPMD] marine metagenome; 120 m water sample filtered on 30 um supor filter
Species
Start position on genome 126
End posion on genome 50
Amino Acid fMet
Anticodon CAT
Upstream region at tRNA start position 
tacaatttag
tRNA gene sequence 
CGCGGGGTGGAGCAGTCCGGTAGCTCGTCAGGCTCATAACCTGAAGGTCGTAGGTTCAAA
TCCTACCCCCGCAACCA
Downstream region at tRNA end position 
gaattccctt
Secondary structure (Cloverleaf model)
>WENV180085903	fMet	CAT
                   g      ACCA gaattccctt
                     C   A
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C A T C C     A
      T G A        G      | | | | |     A
    C       C G A G       G T A G G     C
    C       | | | |                 T T
    G       G C T C
      G T A        G     AGGTC
                    T - A
                    C - G
                    A - T
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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