The detailed information of tRNA gene sequence


Sequence ID>WENV180085904
Genome IDMPMD02389857
Search identical group
Phylum/Class[MPMD] marine metagenome; 120 m water sample filtered on 30 um supor filter
Species
Start position on genome 433
End posion on genome 506
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
caaccgattt
tRNA gene sequence 
AGGGAGTTAGTTTAATGGTAAAATTACGGACTCCAAATCCGTCAATAAGGGTTCGATTCC
TTTACTCCCTGCCA
Downstream region at tRNA end position 
atgctggtgt
Secondary structure (Cloverleaf model)
>WENV180085904	Trp	CCA
                   t      GCCA atgctggtgt
                     A - T
                     G - C
                     G - C
                     G - C
                     A - T
                     G - C
                     T - A          T T
                    T     T T T C C     A
        A A        A      | | + | |     G
      T     T T T G       A A G G G     C
      G     | | | +                 T T
      G     A A A T
        T A        T     CAAT
                    A - T
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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