The detailed information of tRNA gene sequence


Sequence ID>WENV180085922
Genome IDMPMD02392878
Search identical group
Phylum/Class[MPMD] marine metagenome; 120 m water sample filtered on 30 um supor filter
Species
Start position on genome 4753
End posion on genome 4844
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
cggcgcccgc
tRNA gene sequence 
GGAGAGGTGGCGGAGCTCGGTTGAACGCGCCTGATTCGAAATCAGGTGTACTCGCAAGGG
TACCGTGGGTTCGAATCCCACCCTCTCCGCCA
Downstream region at tRNA end position 
ctgagtccgc
Secondary structure (Cloverleaf model)
>WENV180085922	Ser	CGA
                   c      GCCA ctgagtccgc
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C A C C C     A
    T C G A        G      | | | | |     G
  C         G G C G       G T G G G     C
  G           | | |                 T T
  G         A C G C
    T T G A        G     TGTACTCGCAAGGGTACC
                    C - G
                    C - G
                    T - A
                    G - C
                    A - T
                  T       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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