The detailed information of tRNA gene sequence


Sequence ID>WENV180085943
Genome IDMPMD02395800
Search identical group
Phylum/Class[MPMD] marine metagenome; 120 m water sample filtered on 30 um supor filter
Species
Start position on genome 195
End posion on genome 120
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
agtgaaaaat
tRNA gene sequence 
AGGCCAGTAGCTCAATTGGCAGAGCGGCGGTCTCCAAAACCGCAGGTTGGGGGTTCGATT
CCCTCCTGGCCTGCCA
Downstream region at tRNA end position 
ggacaaacgt
Secondary structure (Cloverleaf model)
>WENV180085943	Trp	CCA
                   t      GCCA ggacaaacgt
                     A - T
                     G - C
                     G - C
                     C - G
                     C - G
                     A - T
                     G - C          T T
                    T     C T C C C     A
      T A A        A      | + | | |     G
    T       C T C G       G G G G G     C
    G       | | | |                 T T
    G       G A G C
      C A          G     AGGTT
                    G - C
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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