The detailed information of tRNA gene sequence


Sequence ID>WENV180085992
Genome IDMPMD02406349
Search identical group
Phylum/Class[MPMD] marine metagenome; 120 m water sample filtered on 30 um supor filter
Species
Start position on genome 1623
End posion on genome 1720
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
catccacgac
tRNA gene sequence 
GGGAGTGGATCGGTGCTGGTGTGCCGCCCGGCCTTCAAAGCCGGTTGGGCTGCGTGAACA
GCGTGGCCGGTGGGTTCGATTCCCATGCACTCCCGCCA
Downstream region at tRNA end position 
ttttgaacat
Secondary structure (Cloverleaf model)
>WENV180085992	SeC	TCA
                   c      GCCA ttttgaacat
                     G - C
                     G - C
                     G - C
                     A - T
                     G - C
                     T - A
                     G - C
                     G   G          T T
                    A     T A C C C     A
      T C G        T      + | | | |     G
    G       T G G C       G T G G G     C
    G       + | | |                 T T
    T       G C C G
      G T          C     TTGGGCTGCGTGAACAGCGTGGCCG
                    C - G
                    C - G
                    G - C
                    G - C
                    C - G
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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