The detailed information of tRNA gene sequence


Sequence ID>WENV180086001
Genome IDMPMD02407927
Search identical group
Phylum/Class[MPMD] marine metagenome; 120 m water sample filtered on 30 um supor filter
Species
Start position on genome 1015
End posion on genome 1089
Amino Acid fMet
Anticodon CAT
Upstream region at tRNA start position 
ttcaactgat
tRNA gene sequence 
CGCGGGGTGGAGCAGTCTGGTAGCTCGTCGGGCTCATAACCCGGAGGTCACTGGTTCGAA
TCCGGTCCCCGCTACaa
Downstream region at tRNA end position 
taaaaacccc
Secondary structure (Cloverleaf model)
>WENV180086001	fMet	CAT
                   t      ACaa taaaaacccc
                     C   T
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     T G G C C     A
      T G A        G      | | + | |     G
    C       C G A G       A C T G G     C
    T       | | | |                 T T
    G       G C T C
      G T A        G     AGGTC
                    T + G
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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