The detailed information of tRNA gene sequence


Sequence ID>WENV180086002
Genome IDMPMD02408031
Search identical group
Phylum/Class[MPMD] marine metagenome; 120 m water sample filtered on 30 um supor filter
Species
Start position on genome 1538
End posion on genome 1465
Amino Acid Ile2
Anticodon CAT
Upstream region at tRNA start position 
ccatgcttcc
tRNA gene sequence 
GGGCCCATAGCTCAATGGTGAGAGCAGGGGTCTCATAAACCCTTGGTTCCCGGTTCGAAT
CCGGGTGGGCCCACtt
Downstream region at tRNA end position 
ccacctcccc
Secondary structure (Cloverleaf model)
>WENV180086002	Ile2	CAT
                   c      ACtt ccacctcccc
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     A - T          T A
                    T     G G G C C     A
      T A A        A      | | | | |     G
    G       C T C G       C C C G G     C
    G       | | | |                 T T
    T       G A G C
      G A          A     TGGTT
                    G + T
                    G - C
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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