The detailed information of tRNA gene sequence


Sequence ID>WENV180086021
Genome IDMPMD02409247
Search identical group
Phylum/Class[MPMD] marine metagenome; 120 m water sample filtered on 30 um supor filter
Species
Start position on genome 233
End posion on genome 315
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
ttctaacatg
tRNA gene sequence 
GACACTTTGGCCGAGCGGTTAAGGCGTCGGCTTGCTAAGCCGATGGGGTCTCCCCGCGTG
GGTTCGAATCCCACAGGTGTCGCtt
Downstream region at tRNA end position 
ttccgacgac
Secondary structure (Cloverleaf model)
>WENV180086021	Ser	GCT
                   g      GCtt ttccgacgac
                     G - C
                     A - T
                     C - G
                     A - T
                     C - G
                     T + G
                     T - A          T A
                    T     C A C C C     A
      C G A        G      | | | | |     G
    G       G C C G       G T G G G     C
    G         | | |                 T T
    T       A G G C
      T A          G     TGGGGTCTCCCCGC
                    T - A
                    C - G
                    G - C
                    G - C
                    C - G
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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