The detailed information of tRNA gene sequence


Sequence ID>WENV180086031
Genome IDMPMD02410539
Search identical group
Phylum/Class[MPMD] marine metagenome; 120 m water sample filtered on 30 um supor filter
Species
Start position on genome 1035
End posion on genome 960
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
nnnntagttt
tRNA gene sequence 
CGGAGTGTAGCGCAGTCCGGTTAGCGCACCTGCTTTGGGAGCAGGGGGTCGGAGGTTCGA
ATCCTCTCACTCCGACac
Downstream region at tRNA end position 
gtcagaaacc
Secondary structure (Cloverleaf model)
>WENV180086031	Pro	TGG
                   t      ACac gtcagaaacc
                     C - G
                     G - C
                     G - C
                     A - T
                     G - C
                     T - A
                     G - C          T A
                    T     T C T C C     A
    C T G A        A      + | | | |     G
  C         C G C G       G G A G G     C
  G         | | | |                 T T
  G         G C G C
    T T A          A     GGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  T       A
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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