The detailed information of tRNA gene sequence


Sequence ID>WENV180086037
Genome IDMPMD02411871
Search identical group
Phylum/Class[MPMD] marine metagenome; 120 m water sample filtered on 30 um supor filter
Species
Start position on genome 580
End posion on genome 499
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
cccctgcaga
tRNA gene sequence 
GACAGTATGTCCGAGCGGTTAAGGAGATGGACTCGAAATCCATTGGGCTCTGCCCGCAGG
GGTTCGAATCCCCTCGCTGTCGtgt
Downstream region at tRNA end position 
tgcgcagttt
Secondary structure (Cloverleaf model)
>WENV180086037	Ser	CGA
                   a      Gtgt tgcgcagttt
                     G - C
                     A - T
                     C - G
                     A - T
                     G - C
                     T + G
                     A   C          T A
                    T     T C C C C     A
      C G A        G      | | | | |     G
    G       G C C T       A G G G G     C
    G         | | |                 T T
    T       A G G A
      T A          G     TGGGCTCTGCCCGC
                    A - T
                    T - A
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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