The detailed information of tRNA gene sequence


Sequence ID>WENV180086060
Genome IDMPMD02415614
Search identical group
Phylum/Class[MPMD] marine metagenome; 120 m water sample filtered on 30 um supor filter
Species
Start position on genome 521
End posion on genome 432
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
atttttttca
tRNA gene sequence 
GGAGAGATGCCGGAGTGGTCGAACGGGCCTGCTTGGAGTGCAGGTGTGCCTTCACGGGTA
CCCAGGGTTCGAATCCCTGTCTCTCCGCCA
Downstream region at tRNA end position 
tttttccata
Secondary structure (Cloverleaf model)
>WENV180086060	Ser	GGA
                   a      GCCA tttttccata
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     G T C C C     A
      T G A        G      | | | | |     G
    G       G G C C       C A G G G     C
    G         | | |                 T T
    T       A C G G
      C G A        G     TGTGCCTTCACGGGTACC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  T       T
                  T       G
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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