The detailed information of tRNA gene sequence


Sequence ID>WENV180086071
Genome IDMPMD02418520
Search identical group
Phylum/Class[MPMD] marine metagenome; 120 m water sample filtered on 30 um supor filter
Species
Start position on genome 264
End posion on genome 190
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
acccaaaaag
tRNA gene sequence 
GGTTTCATCGTCTAGTGGTAAGGATATTGCCCTGTCACGGCAAAGACATGGGTTCAAATC
CCATTGAGACCGCCA
Downstream region at tRNA end position 
actaggaatt
Secondary structure (Cloverleaf model)
>WENV180086071	Asp	GTC
                   g      GCCA actaggaatt
                     G - C
                     G - C
                     T - A
                     T + G
                     T - A
                     C - G
                     A - T          T A
                    T     T A C C C     A
      T G A        C      | | | | |     A
    G       T C T G       A T G G G     C
    G       + | | +                 T T
    T       G G A T
      A A          A     AGAC
                    T - A
                    T - A
                    G - C
                    C - G
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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