The detailed information of tRNA gene sequence


Sequence ID>WENV180086092
Genome IDMPMD02420269
Search identical group
Phylum/Class[MPMD] marine metagenome; 120 m water sample filtered on 30 um supor filter
Species
Start position on genome 3450
End posion on genome 3359
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
actacaactt
tRNA gene sequence 
GGAGAGGTGGCCGAGCTGGCTGAAGGCGCCCGCCTGCTAAGTGGGTGTAGGGCTTAACAC
TCTACCGAGGGTTCGAATCCCTCCCTCTCCGCtc
Downstream region at tRNA end position 
ttaaagtcag
Secondary structure (Cloverleaf model)
>WENV180086092	Ser	GCT
                   t      GCtc ttaaagtcag
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
    T C G A        G      | | | | |     G
  G         G C C G       G A G G G     C
  G           | | |                 T T
  C         A G G C
    T G A          G     TGTAGGGCTTAACACTCTACC
                    C - G
                    C - G
                    C - G
                    G + T
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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