The detailed information of tRNA gene sequence


Sequence ID>WENV180086104
Genome IDMPMD02421175
Search identical group
Phylum/Class[MPMD] marine metagenome; 120 m water sample filtered on 30 um supor filter
Species
Start position on genome 550
End posion on genome 477
Amino Acid fMet
Anticodon CAT
Upstream region at tRNA start position 
atgataataa
tRNA gene sequence 
AGTAGGGTAGAGCAGCCTGGTAGCTCGCAAGGCTCATAATCTTGAGGTCGTTGGTTCAAA
TCCAGCCCCTGCTAtat
Downstream region at tRNA end position 
taaatcgtat
Secondary structure (Cloverleaf model)
>WENV180086104	fMet	CAT
                   a      Atat taaatcgtat
                     A - T
                     G - C
                     T + G
                     A - T
                     G - C
                     G - C
                     G - C          T A
                    T     C G A C C     A
      C G A        A      | + | | |     A
    C       C G A G       G T T G G     C
    T       | | | |                 T T
    G       G C T C
      G T A        G     AGGTC
                    C - G
                    A - T
                    A - T
                    G - C
                    G + T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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