The detailed information of tRNA gene sequence


Sequence ID>WENV180086223
Genome IDMPMD02438813
Search identical group
Phylum/Class[MPMD] marine metagenome; 120 m water sample filtered on 30 um supor filter
Species
Start position on genome 3408
End posion on genome 3503
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
cgtcgacccc
tRNA gene sequence 
GGAGGTGTCTGAGTACCTGGTGGGCTCCCCCGCCTTCAAAGCGGGTGGGACGGGCGATCC
CCGTCCGGCGGGTTCGATTCCCGTCCACCTCCGCCA
Downstream region at tRNA end position 
atccggcccc
Secondary structure (Cloverleaf model)
>WENV180086223	SeC	TCA
                   c      GCCA atccggcccc
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     T - A
                     G - C
                     T   C          T T
                    C     T G C C C     A
      C C A        T      + | | | |     G
    T       T G A G       G C G G G     C
    G       + | | |                 T T
    G       G C T C
      T G G        C     TGGGACGGGCGATCCCCGTCCG
                    C - G
                    C - G
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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