The detailed information of tRNA gene sequence


Sequence ID>WENV180086259
Genome IDMPMD02444002
Search identical group
Phylum/Class[MPMD] marine metagenome; 120 m water sample filtered on 30 um supor filter
Species
Start position on genome 295
End posion on genome 384
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
acctagctag
tRNA gene sequence 
GGAGAGATGGCTGAGCGGTTGAAAGCGCACGCTTGGAAAGTGTGTATACGGGAAACCGTA
TCGTGGGTTCGAATCCCACTCTCTCCGCCA
Downstream region at tRNA end position 
ttaatttaag
Secondary structure (Cloverleaf model)
>WENV180086259	Ser	GGA
                   g      GCCA ttaatttaag
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C A C C C     A
      C G A        G      | | | | |     G
    G       G T C G       G T G G G     C
    G         | | |                 T T
    T       A A G C
      T G A        G     TATACGGGAAACCGTATC
                    C - G
                    A - T
                    C - G
                    G + T
                    C - G
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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