The detailed information of tRNA gene sequence


Sequence ID>WENV180086260
Genome IDMPMD02444090
Search identical group
Phylum/Class[MPMD] marine metagenome; 120 m water sample filtered on 30 um supor filter
Species
Start position on genome 4526
End posion on genome 4440
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
aggttcaacg
tRNA gene sequence 
GGAGCGGTGGCTGAGTGGTCGAAAGCGCGGGTTTGCTAAATCCGTGATCTCGTGAGGGAT
CCGCAGGTTCGAATCCTGTCCGCTCCGttt
Downstream region at tRNA end position 
gaaagctggg
Secondary structure (Cloverleaf model)
>WENV180086260	Ser	GCT
                   g      Gttt gaaagctggg
                     G - C
                     G - C
                     A - T
                     G - C
                     C - G
                     G - C
                     G - C          T A
                    T     T G T C C     A
      T G A        G      + | | | |     G
    G       G T C G       G C A G G     C
    G         | | |                 T T
    T       A A G C
      C G A        G     TGATCTCGTGAGGGATCC
                    C - G
                    G - C
                    G - C
                    G + T
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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