The detailed information of tRNA gene sequence


Sequence ID>WENV180086274
Genome IDMPMD02446419
Search identical group
Phylum/Class[MPMD] marine metagenome; 120 m water sample filtered on 30 um supor filter
Species
Start position on genome 1585
End posion on genome 1674
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
agaaccctgt
tRNA gene sequence 
GGAGGGGTGGCCGAGTGGCTGAAGGCGCACGCTTGGAAAGCGTGTATGCGGGAAACCGTA
TCGAGGGTTCGAATCCCTCCCTCTCCGCCA
Downstream region at tRNA end position 
atccccagta
Secondary structure (Cloverleaf model)
>WENV180086274	Ser	GGA
                   t      GCCA atccccagta
                     G - C
                     G - C
                     A - T
                     G - C
                     G + T
                     G - C
                     G - C          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G C C G       G A G G G     C
    G         | | |                 T T
    C       A G G C
      T G A        G     TATGCGGGAAACCGTATC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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