The detailed information of tRNA gene sequence


Sequence ID>WENV180086280
Genome IDMPMD02446957
Search identical group
Phylum/Class[MPMD] marine metagenome; 120 m water sample filtered on 30 um supor filter
Species
Start position on genome 1562
End posion on genome 1479
Amino Acid Ala
Anticodon CGC
Upstream region at tRNA start position 
nnnnnnntgT
tRNA gene sequence 
GACACTGTGTCCGAGCGGTTAAGGAGATGGACTCGCAATCCATTGGGCTCTGCCCGCAGG
GGTTCGAATCCCCTCGGTGTCGTtt
Downstream region at tRNA end position 
ttcgcccttg
Secondary structure (Cloverleaf model)
>WENV180086280	Ala	CGC
                   T      GTtt ttcgcccttg
                     G - C
                     A - T
                     C - G
                     A - T
                     C - G
                     T + G
                     G - C          T A
                    T     T C C C C     A
      C G A        G      | | | | |     G
    G       G C C T       A G G G G     C
    G         | | |                 T T
    T       A G G A
      T A          G     TGGGCTCTGCCCGC
                    A - T
                    T - A
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    C G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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