The detailed information of tRNA gene sequence


Sequence ID>WENV180086325
Genome IDMPMD02454611
Search identical group
Phylum/Class[MPMD] marine metagenome; 120 m water sample filtered on 30 um supor filter
Species
Start position on genome 923
End posion on genome 850
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
caaccgattt
tRNA gene sequence 
AGGGAGTTAGTTTAATGGTAAAATTACGGACTCCAAATCCGTCAATAAGGGTTCGATTCC
TTTACTCCCTGCCA
Downstream region at tRNA end position 
tccagagtag
Secondary structure (Cloverleaf model)
>WENV180086325	Trp	CCA
                   t      GCCA tccagagtag
                     A - T
                     G - C
                     G - C
                     G - C
                     A - T
                     G - C
                     T - A          T T
                    T     T T T C C     A
        A A        A      | | + | |     G
      T     T T T G       A A G G G     C
      G     | | | +                 T T
      G     A A A T
        T A        T     CAAT
                    A - T
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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