The detailed information of tRNA gene sequence


Sequence ID>WENV180086393
Genome IDMPMD02462689
Search identical group
Phylum/Class[MPMD] marine metagenome; 120 m water sample filtered on 30 um supor filter
Species
Start position on genome 24217
End posion on genome 24292
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
gcgaagctgg
tRNA gene sequence 
AGGGGTATAGCTCAGTTGGTAGAGCAGCTGATTCCAAATCAGCAGGTCCTGGGTTCAAGT
CCTAGTGCCCCTGCCA
Downstream region at tRNA end position 
tccagaaagc
Secondary structure (Cloverleaf model)
>WENV180086393	Trp	CCA
                   g      GCCA tccagaaagc
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C
                     T + G
                     A - T          T G
                    T     G A T C C     A
      T G A        A      | | + | |     A
    T       C T C G       C T G G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     AGGTC
                    G - C
                    C - G
                    T - A
                    G - C
                    A - T
                  T       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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