The detailed information of tRNA gene sequence


Sequence ID>WENV180086429
Genome IDMPMD02467986
Search identical group
Phylum/Class[MPMD] marine metagenome; 120 m water sample filtered on 30 um supor filter
Species
Start position on genome 38761
End posion on genome 38837
Amino Acid Val
Anticodon CAC
Upstream region at tRNA start position 
gctttaggag
tRNA gene sequence 
GGGGCGTTAGCTCAGCTGGCTAGAGCGCCGTGCTCACACCGCGGAGGTCACTGGTTCGAG
TCCAGTACGCCCCACCA
Downstream region at tRNA end position 
ttccagcgat
Secondary structure (Cloverleaf model)
>WENV180086429	Val	CAC
                   g      ACCA ttccagcgat
                     G - C
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C
                     T - A          T G
                    T     T G A C C     A
      C G A        A      | | | | |     G
    T       C T C G       A C T G G     C
    G       | | | |                 T T
    G       G A G C
      C T A        G     AGGTC
                    C - G
                    C - G
                    G - C
                    T + G
                    G - C
                  C       C
                  T       A
                    C A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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