The detailed information of tRNA gene sequence


Sequence ID>WENV180086448
Genome IDMPMD02470054
Search identical group
Phylum/Class[MPMD] marine metagenome; 120 m water sample filtered on 30 um supor filter
Species
Start position on genome 114
End posion on genome 41
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
aagagaggcc
tRNA gene sequence 
GTTGAGGTGCCGGAGTGGTTAACGGGGTGGATTGCAAATCCATTATTCGGGAGTTCGAAT
CTCCCCCTCAACTCaa
Downstream region at tRNA end position 
aaatatgaaa
Secondary structure (Cloverleaf model)
>WENV180086448	Cys	GCA
                   c      TCaa aaatatgaaa
                     G - C
                     T - A
                     T - A
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C C C T C     A
      T G A        G      | | | | |     G
    G       G G C C       G G G A G     C
    G         | | |                 T T
    T       A C G G
      T A          G     TATTC
                    G + T
                    T - A
                    G - C
                    G - C
                    A - T
                  T       A
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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