The detailed information of tRNA gene sequence


Sequence ID>WENV180086487
Genome IDMPMD02475954
Search identical group
Phylum/Class[MPMD] marine metagenome; 120 m water sample filtered on 30 um supor filter
Species
Start position on genome 107
End posion on genome 178
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
acagggaggc
tRNA gene sequence 
GGCCTCATGGTGTAGCGGTAGCACTTCGGATTCCAAATCCGACAACGGCGGTTCGATTCC
GTCTGAGGTCACag
Downstream region at tRNA end position 
tttgagctcg
Secondary structure (Cloverleaf model)
>WENV180086487	Trp	CCA
                   c      ACag tttgagctcg
                     G - C
                     G + T
                     C - G
                     C - G
                     T - A
                     C - G
                     A - T          T T
                    T     C T G C C     A
        G A        G      | + | | |     G
      C     T G T G       G G C G G     C
      G     + | | |                 T T
      G     G C A C
        T A        T     CAAC
                    T - A
                    C - G
                    G - C
                    G - C
                    A - T
                  T       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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