The detailed information of tRNA gene sequence


Sequence ID>WENV180086565
Genome IDMPMD02485024
Search identical group
Phylum/Class[MPMD] marine metagenome; 120 m water sample filtered on 30 um supor filter
Species
Start position on genome 332
End posion on genome 250
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
gcgctcgacc
tRNA gene sequence 
GACGCTTTGGCCGAGTGGTTAAGGCGCTCGCCTGCTAAGTGAGTGGACTTCGTCCGCAGG
GGTTCGAATCCCCTAGGCGTCGCat
Downstream region at tRNA end position 
ctttttttct
Secondary structure (Cloverleaf model)
>WENV180086565	Ser	GCT
                   c      GCat ctttttttct
                     G - C
                     A - T
                     C - G
                     G - C
                     C - G
                     T + G
                     T - A          T A
                    T     T C C C C     A
      T G A        G      | | | | |     G
    G       G C C G       A G G G G     C
    G         | | |                 T T
    T       A G G C
      T A          G     TGGACTTCGTCCGC
                    C - G
                    T - A
                    C - G
                    G + T
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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