The detailed information of tRNA gene sequence


Sequence ID>WENV180086589
Genome IDMPMD02488616
Search identical group
Phylum/Class[MPMD] marine metagenome; 120 m water sample filtered on 30 um supor filter
Species
Start position on genome 692
End posion on genome 782
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
ggcgccccgc
tRNA gene sequence 
GGAGAGGTGGCTGAGTGGTTGAAAGCGCACGCCTGGAAAGTGTGTATACGTTAATAGCGT
ATCGAGGGTTCGAATCCCTCCCTCTCCGCCA
Downstream region at tRNA end position 
gtttttgtga
Secondary structure (Cloverleaf model)
>WENV180086589	Ser	GGA
                   c      GCCA gtttttgtga
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G T C G       G A G G G     C
    G         | | |                 T T
    T       A A G C
      T G A        G     TATACGTTAATAGCGTATC
                    C - G
                    A - T
                    C - G
                    G + T
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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