The detailed information of tRNA gene sequence


Sequence ID>WENV180086599
Genome IDMPMD02490518
Search identical group
Phylum/Class[MPMD] marine metagenome; 120 m water sample filtered on 30 um supor filter
Species
Start position on genome 3332
End posion on genome 3237
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
cgccaacatt
tRNA gene sequence 
GGGGATGATTGCGAGGCTGGTGCCCGCCGCGGTCTTCAACACCGTTGAGACGGCGGAGAG
CCGTTTGCTGGGTTCGATTCCCAGGCGTTCCCGCCA
Downstream region at tRNA end position 
gaattcaaaa
Secondary structure (Cloverleaf model)
>WENV180086599	SeC	TCA
                   t      GCCA gaattcaaaa
                     G - C
                     G - C
                     G - C
                     G + T
                     A - T
                     T + G
                     G - C
                     A   G          T T
                    T     G A C C C     A
      C G G        T      | | | | |     G
    T       A G C G       C T G G G     C
    G         | | |                 T T
    G       C C G C
      T G C        C     TGAGACGGCGGAGAGCCGTTTG
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       C
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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