The detailed information of tRNA gene sequence


Sequence ID>WENV180086621
Genome IDMPMD02493015
Search identical group
Phylum/Class[MPMD] marine metagenome; 120 m water sample filtered on 30 um supor filter
Species
Start position on genome 717
End posion on genome 805
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
gaataaactt
tRNA gene sequence 
GGAGAGGTGGCCGAGTGGCTTAAGGCGCACGCTTGGAAAGCGTGTGTGCGTTAATAGCGT
ACCGTGGGTTCGAATCCCACCCTCTCCGCtt
Downstream region at tRNA end position 
taccctcatg
Secondary structure (Cloverleaf model)
>WENV180086621	Ser	GGA
                   t      GCtt taccctcatg
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C A C C C     A
      T G A        G      | | | | |     G
    G       G C C G       G T G G G     C
    G         | | |                 T T
    C       A G G C
      T T A        G     TGTGCGTTAATAGCGTACC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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