The detailed information of tRNA gene sequence


Sequence ID>WENV180086635
Genome IDMPMD02495983
Search identical group
Phylum/Class[MPMD] marine metagenome; 120 m water sample filtered on 30 um supor filter
Species
Start position on genome 876
End posion on genome 800
Amino Acid fMet
Anticodon CAT
Upstream region at tRNA start position 
gtcgcctcac
tRNA gene sequence 
CGCGGGGTGGAGCAGTCTGGCAGCTCGTCGGGCTCATAACCCGGAGGTCGTAGGTTCGAA
TCCTACCCCCGCTACCA
Downstream region at tRNA end position 
cttccaagag
Secondary structure (Cloverleaf model)
>WENV180086635	fMet	CAT
                   c      ACCA cttccaagag
                     C   T
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C A T C C     A
      T G A        G      | | | | |     G
    C       C G A G       G T A G G     C
    T       | | | |                 T T
    G       G C T C
      G C A        G     AGGTC
                    T + G
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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